prec_rate
returns the sample size or the precision for the provided
rate.
Usage
prec_rate(
r,
x = NULL,
conf.width = NULL,
conf.level = 0.95,
method = c("score", "vs", "exact", "wald"),
...
)
Arguments
- r
rate or rate ratio.
- x
number of events.
- conf.width
precision (the full width of the confidence interval). Should not exceed 5 times
r
.- conf.level
confidence level.
- method
The method to use to calculate precision. Exactly one method may be provided. Methods can be abbreviated.
- ...
other arguments to uniroot (e.g.
tol
).
Value
Object of class "presize", a list of arguments (including the computed one) augmented with method and note elements.
Details
Exactly one of the parameters r
or conf.width
must be passed as NULL,
and that parameter is determined from the other.
The score
, variance stabilizing (vs
), exact
, and
wald
method are implemented to calculate the rate and the precision.
For few events x
(<5), the exact method is recommended.
If more than one method is specified or the method is miss-specified, the 'score' method will be used.
uniroot
is used to solve n for the score and
exact method.
References
Barker, L. (2002) A Comparison of Nine Confidence Intervals for a Poisson Parameter When the Expected Number of Events is \(\le\) 5, The American Statistician, 56:2, 85-89, doi:10.1198/000313002317572736
Examples
# confidence interval width for a rate of 2.5 events per unit and 20 events,
# using the score method
prec_rate(2.5, x = 20, met = "score")
#>
#> precision for a rate with score confidence interval
#>
#> r radj x time conf.width conf.level lwr upr
#> 1 2.5 2.740091 20 8 2.243301 0.95 1.618441 3.861742
#>
#> NOTE: 'x / r' units of time are needed to accumulate 'x' events.
#>
# number of events to yield a CI width of 2.243 for a rate of 2.5 events per
# unit and 20 events, using the score method
prec_rate(2.5, conf.width = 2.243, met = "score")
#>
#> sample size for a rate with score confidence interval
#>
#> r radj x time conf.width conf.level lwr upr
#> 1 2.5 2.74003 20.00514 8.002055 2.243 0.95 1.61853 3.86153
#>
#> NOTE: 'x / r' units of time are needed to accumulate 'x' events.
#>
# confidence interval width for a rate of 2.5 events per unit and 20 events,
# using the exact method
prec_rate(2.5, x = 20, met = "exact")
#>
#> precision for a rate with exact confidence interval
#>
#> r radj x time conf.width conf.level lwr upr
#> 1 2.5 2.5 20 8 2.333982 0.95 1.527065 3.861047
#>
#> NOTE: 'x / r' units of time are needed to accumulate 'x' events.
#>
# vs and wald have the same conf.width, but different lwr and upr
prec_rate(2.5, x = 20, met = "vs")
#>
#> precision for a rate with vs confidence interval
#>
#> r radj x time conf.width conf.level lwr upr
#> 1 2.5 2.620046 20 8 2.191306 0.95 1.524392 3.715699
#>
#> NOTE: 'x / r' units of time are needed to accumulate 'x' events.
#>
prec_rate(2.5, x = 20, met = "wald")
#>
#> precision for a rate with wald confidence interval
#>
#> r radj x time conf.width conf.level lwr upr
#> 1 2.5 2.5 20 8 2.191306 0.95 1.404347 3.595653
#>
#> NOTE: 'x / r' units of time are needed to accumulate 'x' events.
#>